Title (en)
Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
Language
English
Description (en)
Parasitoid wasps in the genus Encarsia are commonly used as biological pest control agents of whiteflies and armored scale insects in greenhouses or the field. They are also hosts of the bacterial endosymbiont Cardinium hertigii, which can cause reproductive manipulation phenotypes, including parthenogenesis, feminization, and cytoplasmic incompatibility (the last is mainly studied in Encarsia suzannae). Despite their biological and economic importance, there are no published Encarsia genomes and only one public transcriptome. Here, we applied a mapping-and-removal approach to eliminate known contaminants from previously-obtained Illumina sequencing data. We generated de novo transcriptome assemblies for both female and male E. suzannae which contain 45,986 and 54,762 final coding sequences, respectively. Benchmarking Single-Copy Orthologs results indicate both assemblies are highly complete. Preliminary analyses revealed the presence of homologs of sex-determination genes characterized in other insects and putative venom proteins. Our male and female transcriptomes will be valuable tools to better understand the biology of Encarsia and their evolutionary relatives, particularly in studies involving insects of only one sex.
Keywords (en)
Genetics and Genomics, Animal Genetics, Transcriptomics
DOI
10.46471/gigabyte.68
Author of the digital object
Dylan L. Schultz (Iowa State University)
Stephan Schmitz-Esser (Iowa State University)
Martha S. Hunter (The University of Arizona)
Suzanne E. Kelly (The University of Arizona)
Matthew R. Doremus (The University of Arizona)
Corinne M. Stouthamer (The University of Arizona)
Evelyne Selberherr (University of Veterinary Medicine Vienna)
Format
application/pdf
Size
1.5 MB
Licence Selected
Type of publication
Article
Name of Publication (en)
Giga Byte
Pages or Volume
13
Volume
2022
Publisher
BGI
Publisher
Oxford University Press
Publication Date
2022
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DOI
https://phaidra.vetmeduni.ac.at/o:2733
https://doi.org/10.46471/gigabyte.68 - Content
- DetailsObject typePDFDocumentFormatapplication/pdfCreated15.03.2024 09:10:20 UTC
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