Title (en)
Refining the Camelus dromedarius Myostatin Gene Polymorphism through Worldwide Whole-Genome Sequencing
Language
English
Description (en)
Myostatin (MSTN) is a highly conserved negative regulator of skeletal muscle in mammals. Inactivating mutations results in a hyper-muscularity phenotype known as "double muscling" in several livestock and model species. In Camelus dromedarius, the gene structure organization and the sequence polymorphisms have been previously investigated, using Sanger and Next-Generation Sequencing technologies on a limited number of animals. Here, we carried out a follow-up study with the aim to further expand our knowledge about the sequence polymorphisms at the myostatin locus, through the whole-genome sequencing data of 183 samples representative of the geographical distribution range for this species. We focused our polymorphism analysis on the ±5 kb upstream and downstream region of the MSTN gene. A total of 99 variants (77 Single Nucleotide Polymorphisms and 22 indels) were observed. These were mainly located in intergenic and intronic regions, with only six synonymous Single Nucleotide Polymorphisms in exons. A sequence comparative analysis among the three species within the Camelus genus confirmed the expected higher genetic distance of C. dromedarius from the wild and domestic two-humped camels compared to the genetic distance between C. bactrianus and C. ferus. In silico functional prediction highlighted: (i) 213 differential putative transcription factor-binding sites, out of which 41 relative to transcription factors, with known literature evidence supporting their involvement in muscle metabolism and/or muscle development; and (ii) a number of variants potentially disrupting the canonical MSTN splicing elements, out of which two are discussed here for their potential ability to generate a prematurely truncated (inactive) form of the protein. The distribution of the considered variants in the studied cohort is discussed in light of the peculiar evolutionary history of this species and the hypothesis that extremely high muscularity, associated with a homozygous condition for mutated (inactivating) alleles at the myostatin locus, may represent, in arid desert conditions, a clear metabolic disadvantage, emphasizing the thermoregulatory and water availability challenges typical of these habitats.
Keywords (en)
Enhancer-Binding Factor; Tgf-Beta Superfamily; Meat Quality; Muscle Mass; Expression; Mutation; Performance; Growth; Roles; Cells
DOI
10.3390/ani12162068
Author of the digital object
Silvia Bruno  (University of Bari "Aldo Moro")
Elena Ciani  (University of Bari "Aldo Moro")
Pamela Burger  (University of Veterinary Medicine Vienna)
André Eggen  (Illumina)
Xavier David  (Illumina)
Kwan Suk Kim  (Chungbuk National University)
Mohammed Piro  (Institut Agronomique et Vétérinaire Hassan II)
Suheil Semir Bechir Gaouar  (Abou Bakr Belkaid University of Tlemcen)
Faisal Almathen  (King Faisal University)
Samantha Ann Brooks  (University of Florida)
Vincenzo Landi  (University of Bari "Aldo Moro")
Gabriele Senczuk  (University of Molise)
Format
application/pdf
Size
923.5 kB
Licence Selected
Type of publication
Article
Name of Publication (en)
Animals
Pages or Volume
12
Volume
12
Number
16
Publisher
MDPI
Publication Date
2022